C2PO - ontology of acts related to content of clinical guidelines
Room 064: Need to setup server connection and thin clients (Hans is going to ask), Ellen's waiting for repsonse to give us access to the room
Jaspreet and Roar:
- Going to add the sentence splitter (by Hans)
- Have removed names, but the dates are still there
- To finish their pre-prosessor and present it next week
Rune:
- Working with Per in Tromsø, he's visiting next week; wednesday and thursday
- Standoff Manager
Ingrid:
- Looking at Thomas' algorithm for learning (training algorithm used for automatic classifications)
- Discuss the training algorithm with Hans
- Have tested the sentence splitter by Hans
- Tags CVK-related events on clinical texts
- To use Java instead of Python for post-tagging
- Adverse event detection
Alexander Perry:
- Ranks guidelines with information from EPJ (anonymized by Jaspreet and Roar)
- Send information regarding DIPS access to Rune, then put it on the wiki
- Everyone who has signed the NDA could access this system, if wanted
Hans:
- Information retrieval
- Sentence splitter
- Summarization of the trajectory of a pasient
- Cross-lingual interface between the EPJs and clinical guidelines
Sentence splitter:
- Jaspreet and Roar are going to use a unmodified version Hans' sentence splitter
- Hash map, checks characters and searches for dot (punktum) and looks for new line and abbreviations
- Regex is the source in what Jaspreet and Roar does
- Use the post-tagger for lemmatization as the next iteration? In need of lemma-lists (look for open alternatives)
- Section based post-tagging before sentence splitting?
- Output: Files with several sentences, with 0 as starting index
- Separate standoff and xml tags
- Could keep several standoff-files for different purposes
Common tools:
- Name Entity Recognition
- All should use BRAT or something similar to view the annotations from Jaspreet and Roar
- Overlapping annotations are too complex for Notator and Semantator
- Code to put tags back in text, so that Hans could use it in an algorithm