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Room 064: Need to setup server connection and thin clients (Hans is going to ask), Ellen's waiting for repsonse to give us access to the room

Jaspreet and Roar:

  • Going to add the sentence splitter (by Hans)
  • Have removed names, but the dates are still there
  • To finish their pre-prosessor and present it next week

Rune:

  • Working with Per in Tromsø, he's visiting next week; wednesday and thursday
  • Standoff Manager

Ingrid:

  • Looking at Thomas' algorithm for learning (training algorithm used for automatic classifications) 
  • Discuss the training algorithm with Hans
  • Have tested the sentence splitter by Hans
  • Tags CVK-related events on clinical texts
  • To use Java instead of Python for post-tagging
  • Adverse event detection

Alexander Perry:

  • Ranks guidelines with information from EPJ (anonymized by Jaspreet and Roar)
  • Send information regarding DIPS access to Rune, then put it on the wiki
  • Everyone who has signed the NDA could access this system, if wanted

Hans:

  • Information retrieval
  • Sentence splitter
  • Summarization of the trajectory of a pasient
  • Cross-lingual interface between the EPJs and clinical guidelines

Sentence splitter:

  • Jaspreet and Roar are going to use a unmodified version Hans' sentence splitter
  • Hash map, checks characters and searches for dot (punktum) and looks for new line and abbreviations
  • Regex is the source in what Jaspreet and Roar does
  • Use the post-tagger for lemmatization as the next iteration? In need of lemma-lists (look for open alternatives)
  • Section based post-tagging before sentence splitting?
  • Output: Files with several sentences, with 0 as starting index
  •  Separate standoff and xml tags
  • Could keep several standoff-files for different purposes

Common tools:

  • Name Entity Recognition
  • All should use BRAT or something similar to view the annotations from Jaspreet and Roar
  • Overlapping annotations are too complex for Notator and Semantator
  • Code to put tags back in text, so that Hans could use it in an algorithm