Kvik: Interactive exploration of genomic data from the NOWAC postgenome biobank

Authors

  • Bjørn Fjukstad University of Tromsø – The Arctic University of Norway
  • Karina Standahl Olsen University of Tromsø – The Arctic University of Norway
  • Mie Jareid University of Tromsø – The Arctic University of Norway
  • Eiliv Lund University of Tromsø – The Arctic University of Norway
  • Lars Ailo Bongo University of Tromsø – The Arctic University of Norway

Abstract

We have developed Kvik, a system for interactive exploration of genomic
data from the Norwegian Women and Cancer (NOWAC) postgenome
biobank. The goal of the NOWAC study is to understand the dynamics
of carcinogenesis through multi-level functional analyses of transcriptomics
and epigenetics using blood and tissue samples. Kvik provides a tool for
exploring gene expression data, incorporating both statistical analysis and
interactive visualizations in a single system. The tool is open-sourced at
github.com/fjukstad/kvik.

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How to Cite

[1]
B. Fjukstad, K. Standahl Olsen, M. Jareid, E. Lund, and L. A. Bongo, “Kvik: Interactive exploration of genomic data from the NOWAC postgenome biobank”, NIKT, Oct. 2014.

Issue

2014: Norsk Informatikkonferanse

Section

Articles

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